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DTI Atlas Builder

eagle-i ID


Resource Type

  1. Software


  1. Resource Description
    This tool creates an Atlas image as an average of several DTI images that will be registered. The registration will be done in two steps - Affine Registration with BRAINSFit - Non Linear Registration with AtlasWerks A final step will apply the transformations to the original DTI images so that the final average can be computed. The main function writes a python script that will be executed to compute the Atlas. By running the tool you will need to fill in informations in a Graphical User Interface and then compute the Atlas. You can also run the tool in command line without using the GUI. Using the GUI you will be able to save or load a dataset file or a parameter file. The tool needs these other tools to work so be sure to have these installed on your computer - ImageMath - ResampleDTIlogEuclidean - CropDTI - dtiprocess - BRAINSFit - AtlasWerks - dtiaverage - DTI-Reg - unu - MriWatcher
  2. Contact
    Kaiser, Adrien
  3. Used by
    Neuroimaging Informatics Tools and Resources Clearinghouse
  4. Website(s)
Provenance Metadata About This Resource Record
  1. workflow state
  2. contributor
  3. created
  4. creator
    nvasilevsky (Nicole Vasilevsky)
  5. mediator
  6. modified

Copyright © 2016 by the President and Fellows of Harvard College
The eagle-i Consortium is supported by NIH Grant #5U24RR029825-02 / Copyright 2016