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BPPalign: Aligning RNA secondary structure probabilities to discover new motifs

eagle-i ID

http://shared.eagle-i.net/i/0000013a-4ad9-e6be-5291-c33f80000000

Resource Type

  1. Software

Properties

  1. Resource Description
    This tool provides basic scripts to run the partition executable RNAstructure on hundreds of homolog sequences from RFAM, and to then visualize the results by averaging across these matrices. Examples from purine-binding and double glycine-binding riboswitches are included. Keywords: Boltzmann, Motif discovery, Riboswitch, RNAstructure
  2. Contact
    Das, Rhiju
  3. Used by
    Stanford University
  4. Operating System
    Any
 
RDFRDF
 
Provenance Metadata About This Resource Record

Copyright © 2016 by the President and Fellows of Harvard College
The eagle-i Consortium is supported by NIH Grant #5U24RR029825-02 / Copyright 2016