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MSMExplorer: A Visualization Application for Markov State Models for Folding

eagle-i ID

http://shared.eagle-i.net/i/0000013a-4ad8-96d3-5291-c33f80000000

Resource Type

  1. Software

Properties

  1. Resource Description
    A java-based visualization application for Markov State Models for folding simulations. The programs is designed as a gui interface for viewing and interacting with MSMs constructed by MSMBuilder. SOURCE CODE NOTICE: for up-to-date source code access please visit: http://github.com/brycecr/msmexplorer Similarly, Up-to-date distributions can be downloaded from https://github.com/brycecr/msmexplorer/downloads but periodic major releases (considered "stable") will still be uploaded to simtk. In the Documents section of this site, you'll find an illustrated Reference and Tutorial PDF and a short tutorial video. Keywords: Folding, GUI, Markov state model, Phase space, protein folding, Visualization
  2. Contact
    Cronkite-Ratcliff, Bryce
  3. Used by
    Stanford University
  4. Operating System
    Any
  5. Operating System
    Other
  6. Coded in
    Java
 
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