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SAFA Footprinting Software

eagle-i ID

http://shared.eagle-i.net/i/0000013a-2d21-db4b-e36c-637980000000

Resource Type

  1. Software

Properties

  1. Resource Description
    Quantitative analysis of gels from hydroxyl radical footprinting and other structure mapping techniques can provide a great deal of insight into the structural details of RNA molecules. We have developed and implemented a software package (SAFA v1.1) that allows rapid quantification of a footprinting gel. By automating many of the steps involved in gel analysis, we estimate that an entire gel with thousands of bands can be quantified in less than 10 minutes. In general all the automated features have amanual override, such that even difficult or exceptional gels can be analyzed with the package.
  2. Contact
    Laederach, Alain
  3. Used by
    Wadsworth Center
  4. Operating System
    Macintosh OS X
  5. Operating System
    Microsoft Windows
  6. Website(s)
    https://simtk.org/home/safa
 
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Copyright © 2016 by the President and Fellows of Harvard College
The eagle-i Consortium is supported by NIH Grant #5U24RR029825-02 / Copyright 2016